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GECSI

Gene Expression-based Chromatin State Imputation

Software and Resources

  • CMImpute
  • CNEP
  • CSREP
  • ChromActivity
  • ChromGene
  • ChromHMM
  • ChromImpute
  • ChromTime
  • ConsHMM Atlas
  • ConsHMM
  • DREM
  • ENSAS
  • GECSI
  • LECIF
  • LEPAE
  • MissenseHMM
  • Roadmap Enhancer-Gene Links
  • SEREND
  • SHARPR
  • STEM
  • map3C
  • χ-CNN
GECSI

GECSI is software for imputing chromatin state annotations from gene expression data.

Access the GECSI project on GitHub

Citation:
Fu J, Ernst J. 
GECSI: large-scale chromatin state imputation from gene expression.
Genome Biology, advanced online publication.

Jason Ernst Research Lab

UCLA Biological Chemistry
615 Charles E. Young Dr. South
350B BSRB
Los Angeles, CA 90095

 

Email: jason.ernst@ucla.edu
Phone: 310-825-3658

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